Convert Seurat spatial data to h5ad format — ConvertSeuratSpatialToH5AD • srtdisk

Convert Seurat spatial data to h5ad format

Usage

ConvertSeuratSpatialToH5AD(
  seurat_obj,
  h5ad_file,
  library_id = "library_1",
  verbose = TRUE
)

Arguments

seurat_obj: Seurat object with spatial data
h5ad_file: H5AD file handle or path to write to
library_id: Library ID for spatial data (default: "library_1")
verbose: Print progress messages