Skip to contents

Reads a Loom file and writes it to TileDB-SOMA format. Routes through a Seurat intermediate.

Usage

LoomToSOMA(source, dest, overwrite = FALSE, verbose = TRUE)

Arguments

source

Path to input .loom file

dest

Output URI for the SOMA experiment

overwrite

If TRUE, overwrite existing output

verbose

Show progress messages

Value

Invisibly returns dest