Stream h5seurat to h5mu (direct HDF5-to-HDF5)

For each assay, creates a modality under /mod/ with the full AnnData layout. Uses the zero-copy CSC<->CSR reinterpretation trick.

Usage

.stream_h5seurat_to_h5mu(h5seurat_path, h5mu_path, gzip = 4L, verbose = TRUE)

Arguments

h5seurat_path

Path to input h5seurat file

h5mu_path

Path to output h5mu file

gzip

Integer gzip compression level

verbose

Logical